If I program a Spartan-6 device using iMPACT, the following message occurs:
Configuration completes successfully and DONE goes High on the board.
Why does this message appear?
If you have "Security Level = 1" or "Security Level = 0" set in your BitGen options, then you might see this warning.
For Spartan-6 FPGA:
The status register is covered by this security setting as it is a config register.
It is expected that it will not be readable with security set, so this warning is flagged.
The warning can be ignored if you have these settings.