If you encounter this behavior, it is likely that the Zynq-PS is in Secure Lockdown.
When in Secure Lockdown mode, the DAP is disabled from the JTAG chain.
This means that only the PL will be available, resulting in QSPI indirect programming failures.
When using the ZC706 board, set the Configuration mode to JTAG cascaded (SW11=All Zero=000000) and power cycle the board.
Then retry the boot.mcs script.
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